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Genomic Data
PBM Motif Data
HLH-8
HLH-2/HLH-8
Interaction Data
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Genomic Data for HLH-8
Links
Gene
hlh-8
Species
$species
Domain
bHLH
IHOP
45951
Swiss-Prot
Q11094
UniPROBE Accession Number
$accession_id
Synonyms
C02B8.4, CeTwist, Helix-loop-helix protein 8, Twist-related protein
$refseq_designator
NP_509367
Wormbase Protein ID
WP:CE24777
EdgeDB Promoter
Phlh-8
Wormbase Gene ID
WBGene00001953
Description (from
Wormbase
)
The hlh-8 gene encodes a helix-loop-helix protein required for normal muscle development, and hence for normal defecation and egg-laying.
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PBM Motif Data for HLH-8
PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)
Reverse Complement (RC)
PWM
<dd><a href="./downloads/Cell09/HLH-8/HLH-8.pwm">View</a>   <a href="downfile.php?id=371&gene=HLH-8&folder=Cell09&RC=0">Save</a></dd>
Top Kmer
AATAAAAC E.S. 0.347
GTTTTATT E.S. 0.347
Downloads
Download the
zip
of all HLH-8 PBM files or view the
downloads directory
for individual files.
-
PBM Motif Data for HLH-2/HLH-8 Heterodimer
PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)
Reverse Complement (RC)
PWM
View
Top Kmer
AACAT.TGG E.S. 0.493
CCA.ATGTT E.S. 0.493
Downloads
Download the
zip
of all HLH-2/HLH-8 interaction files or view the
downloads directory
for individual files.
-
HLH-8 Datasets
Gene
Homodimerizes
Clone Type
Last Modified
Save
View
hlh-8
No
Full length clone
2016-03-24
HLH-8 Insert Sequence
1 VARRKGERVV RKNEVENVQQ RACANRRERQ RTKELNDAFT LLRKLIPSMP
51 SDKMSKIHTL RIATDYISFL DEMQKNGCKL YGHSIFDEKR GYNLQSAFNM
101 WRGNNGYTPI AGPSQLPPLQ SAHIPPPAPS SIPPHCLMPQ PWYQTCPPPK
151 QEFHELCPIS TPNPNSNPNQ LTPIHWQ
Mutations away from WormBase HLH-8 wildtype:
• Methioinine start not included in insert sequence
HLH-8 Interacts With
Clone Type
Last Modified
Save
View
HLH-2
Full length clone
2008-07-23
Supported Browsers:
IE 7.0.6001.18000, Firefox 3.5.11, Google Chrome 5.0.375.125 beta