Function get_magic_quotes_gpc() is deprecated

The error 'Function get_magic_quotes_gpc() is deprecated' occurred in the file '' on line 224.

Function get_magic_quotes_gpc() is deprecated

The error 'Function get_magic_quotes_gpc() is deprecated' occurred in the file '' on line 224.

Function get_magic_quotes_gpc() is deprecated

The error 'Function get_magic_quotes_gpc() is deprecated' occurred in the file '' on line 224.

Function get_magic_quotes_gpc() is deprecated

The error 'Function get_magic_quotes_gpc() is deprecated' occurred in the file '' on line 224.

Function get_magic_quotes_gpc() is deprecated

The error 'Function get_magic_quotes_gpc() is deprecated' occurred in the file '' on line 224.

-Genomic Data for RPH1 Links
Protein
RPH1
UniPROBE Accession Number
UP00348
Species
Saccharomyces cerevisiae
Domain
zf-C2H2
Synonyms
DNA damage-responsive transcriptional repressor RPH1, YER169W
Description
Transcriptional repressor of PHR1, which is a photolyase induced by DNA damage; binds to AG(4) (C(4)T) sequence upstream of PHR1; Rph1p phosphorylation during DNA damage is under control of the MEC...
-PBM Motif Data
Primary Motif (Seed-and-Wobble)
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Primary PWM
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Top Kmer
A.TTAGGGG E.S. 0.481
CCCCTAA.T E.S. 0.481
Primary Motif (BEEML-PBM) (AMADID # 015681)
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Primary PWM
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Consensus
NNNNHRRRRR
YYYYYDNNNN
Primary Motif (BEEML-PBM) (AMADID # 016060)
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Primary PWM
View
Consensus
RNVYNNNNNN
NNNNNNRBNY
Downloads
Download the zip of all Rph1 PBM files or view the downloads directory for individual files.
Link to TFBSshape
This link will take you to the corresponding entry for Rph1 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID348&sourceDB=uniprobe

-Annotations
Target Gene Functional Category Enrichment
1) FunSpec analysis run with p<0.005 without Bonferroni correction (view)
2) FunSpec analysis run with p<0.05 with Bonferroni correction (view)
Conditional Specificity
1) Specific conditions (view)
2) Condition categories (view)
-RPH1 Datasets
Clone ID Clone Type Last Modified Save View
y1026 Full length clone 2016-03-24 search save
Insert sequence
1    MTKLIAPSEI VGGVPVFKPT YEQFEDFYAY CKAINKYGMK SGVVKVIPPK
51   EWKDKLDLPY SAETLQKIKI KSPIQQHISG NKGLFMVQNV EKNKTYNIIQ
101  WKDLSKDYVP PEDPKARRNS RKGSVSKSTK LKLKNFESSF NIDDFEQFRT
151  EYTIDLSDFQ NTERLKFLEE YYWKTLNFTT PMYGADTPGS IFPEGLNVWN
201  VAKLPNILDH METKVPGVND SYLYAGLWKA SFSWHLEDQD LYSINYIHFG
251  APKQWYSIPQ EDRFKFYKFM QEQFPEEAKN CPEFLRHKMF LASPKLLQEN
301  GIRCNEIVHH EGEFMITYPY GYHAGFNYGY NLAESVNFAL EEWLPIGKKA
351  GKCHCISDSV EIDVKKLAKS WRDNNKESKG TPPLNQLPNP AMPLLHRPTL
401  KEMESSSLRS TSPDVGHFSN FKSKSSGVSS PLLSRMKDYS NIVEPTLEDP
451  TLKLKRISSF QEQPLNKLLK RETSQTAMLT DHEDNIVAMS LTSMANSAAS
501  SPRLPLSRLN SSNELSNAQP LLDMTNNTLA FPRPNGPSGL NPLLYISNKN
551  ISGISHSAPH SPVNPNISLI KRVKSPNIVT LNISRESSRS PIALNYEARQ
601  QHSQQHSFST PSTVSNLSTS VLGPLSDTND IKTPHPERPN HKTANRILKK
651  ESPVETSKSN LILSKVASTR QEDSFTSRND DLDKEQGSSP LNSKFAPEEI
701  VLSGKNKIYI CKECQRKFSS GHHLTRHKKS VHSGEKPHSC PKCGKRFKRR
751  DHVLQHLNKK IPCISNETTV DAPIMNPTVQ PQDGKAAINQ QSTPLN

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